DNA Damage Atlas


GSM6573569-PEM-seq_HEK293T_SpCas9_CLIC4




Basic Information

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Sample ID:   

SRR21530177


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-SpCas9 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

CLIC4 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1268903346893652689203682937.7-
chr270682375706839807068342354915.1+
chr1717752400177549481775331418971.1+
chr2145750875457520864575141210087.5-
chrX4093733340937932409376208990.86+
chr156813221568132794681326327713.38-
chr195905976059060972590600327044.58+
chr31281918991281927081281921105682.82+
chr12987631298831329878415007.64-
chr92274674322748687227473534459.56-
Download the Full Peak List



Motif Analysis

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