DNA Damage Atlas


GSM6573590-PEM-seq_HEK293T_CasMINI_FGF18




Basic Information

Manual

Sample ID:   

SRR21530156


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-CasMINI plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

FGF18 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX242970342429724124297237117644-
chr1735731683573533357320119214.9+
chr1474281490742817217428149011807.1+
chr156813221568132799681326329674.17-
chr134750256047502931475027288926.96+
chr21023450621023452701023452658429.62-
chr19355081293551033935510126170.7-
chr101237604161237606231237606165646.89-
chr26532801065328217653280105646.89+
chr31892291341892293531892291445337.48+
Download the Full Peak List



Motif Analysis

Manual





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