DNA Damage Atlas


GSM6573592-PEM-seq_HEK293T_CasMINI-ge4.1_FGF18




Basic Information

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Sample ID:   

SRR21530154


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-CasMINI-ge4.1 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

FGF18 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX24297034242974062429723764856.6-
chr1474281490742817217428149613055.6+
chr1735730643573552357320112360+
chr31892291331892293481892291469351.42+
chr121021518621021520631021520638752.42-
chr156813223268132803681323838362.64+
chr134750271347502931475027138069.89+
chr173623140536231620362314057013.57+
chr71009371241009373251009373246251.73-
chr117036532770365694703654846163.15+
Download the Full Peak List



Motif Analysis

Manual





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