DNA Damage Atlas


GSM6573593-PEM-seq_HEK293T_AsCas12f1_FGF18




Basic Information

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Sample ID:   

SRR21530153


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-AsCas12f1 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

FGF18 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr715252472815252492915252492912552.9-
chrX24297037242972402429723812429.2-
chr1347502716475029314750271711735.5+
chr1735730323573523357320111134+
chr1568132247681327916813263210049.2-
chrX1340361591340363621340361608286.14+
chr21023450621023452671023452628205.3-
chr117036548370365694703654837971.97+
chr147428151274281723742815127971.97+
chr104928044492824549280446276.44+
Download the Full Peak List



Motif Analysis

Manual





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