DNA Damage Atlas


GSM6573594-PEM-seq_HEK293T_Un1Cas12f1_FGF18




Basic Information

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Sample ID:   

SRR21530152


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-Un1Cas12f1 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

FGF18 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX24297035242974082429723740866.2-
chr1568132212681327926813243014500-
chr1347502717475029314750271711052.8+
chr1474281490742817177428150710419.9+
chr173572848357353335732019591.68+
chr146537502065375227653752206348.12-
chr101237604161237606341237606166027.8-
chr121021518481021520661021520486027.8-
chr37820352578203727782037275204.2-
chr61511581201511583231511581225178.56+
Download the Full Peak List



Motif Analysis

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