DNA Damage Atlas


GSM6573603-PEM-seq_HEK293T_AsCas12f1_P2RX5-TAX1BP3




Basic Information

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Sample ID:   

SRR21530143


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-AsCas12f1 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

P2RX5-TAX1BP3 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1568132214681327936813263220818.3-
chr517096686117096714617096706913013.5-
chr177641962764217176421628872.86-
chr196573952657415365739526919.51+
chr175879153587935658793536851.33-
chr21690779211690781301690779216654.64+
chr85500379055004005550037906468.93+
chr146932513369325371693253335843.78-
chr139426802994268230942682294613-
chr156380415763804358638041574613+
Download the Full Peak List



Motif Analysis

Manual





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