DNA Damage Atlas


GSM6573609-PEM-seq_HEK293T_SpCas9_KLHL29




Basic Information

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Sample ID:   

SRR21530137


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-SpCas9 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

KLHL29 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr3195849498195850249195850010153899-
chr1735728903573093357309349508.6-
chr1568132244681327996813238333199+
chr1212992357512992377612992377516667.1-
chr248810566488107674881076616667.1-
chr513444244913444265113444264916584.6-
chrX13162359513162379713162379516584.6-
chr1560167180601673836016718016502.9+
chr1751020215510204195102021516422+
chr212130069212130089712130089216341.9-
Download the Full Peak List



Motif Analysis

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