DNA Damage Atlas


GSM6573611-PEM-seq_HEK293T_AsCas12a_KLHL29




Basic Information

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Sample ID:   

SRR21530135


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-AsCas12a plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

KLHL29 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1568132230681327786813243028241.2-
chr115357221615357242115357221617421.6+
chr1995505569550757955055611845.5+
chr123757163323757183523757183311786.9-
chr1580994596809948008099479611671.3-
chr314393148614393169014393168611671.3-
chr248458177484583824845837711614.4-
chr111850787811850808511850787811502.2+
chr1778294311782945237829451111230.9-
chr621176362117859211783610676.9-
Download the Full Peak List



Motif Analysis

Manual





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