DNA Damage Atlas


GSM6573612-PEM-seq_HEK293T_CasMINI-ge4.1_KLHL29




Basic Information

Manual

Sample ID:   

SRR21530134


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-CasMINI-ge4.1 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

KLHL29 locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1568132217681327786813263219325.9-
chr125248091552481117524809159471.61+
chr22150428521504489215044899378.75-
chr201582698715827192158271929333-
chr82502608225026306250260828541.36+
chr11696674451696676461696674456345.82+
chr12065757672065759682065759676345.82-
chr43595490235955103359551026345.82-
chr98478465884784860847848586314.41-
chr114517297145173174451731716283.3-
Download the Full Peak List



Motif Analysis

Manual





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