DNA Damage Atlas

GSM6595795-embryo_15min_biol_rep2

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR21661169


Source Project ID:   

GSE213884

Cell Type:   

Embryo


Organism:   

Oscheius tipulae


Strain:   

CEW1


Genotype:   

WT


Harvested Time:   

15mins


Targeted break:   

FseI


Spike-in Intensity:   

no spike in


Layout:   

PAIRED


Instrument model:   

Illumina NovaSeq6000


Technique:   

END-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chromosomeIII27781442778149/411.417/
chromosomeI20960092096014/205.708/
chromosomeI50899735089978/205.708/
chromosomeIII42520114252016/205.708/
chromosomeIII59735195973524/205.708/
chromosomeIII92656769265681/205.708/
chromosomeIII93041959304200/205.708/
chromosomeIV25027162502721/205.708/
chromosomeV15271461527151/205.708/
chromosomeI21224472122452/102.854/
Download the Full Peak List


Visualization

Manual





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