DNA Damage Atlas

GSM6595803-embryo_120min_biol_rep1

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR21661177


Source Project ID:   

GSE213884

Cell Type:   

Embryo


Organism:   

Oscheius tipulae


Strain:   

CEW1


Genotype:   

WT


Harvested Time:   

120mins


Spike-in Intensity:   

no spike in


Layout:   

PAIRED


Instrument model:   

Illumina NovaSeq6000


Technique:   

END-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chromosomeI5963853596541159647964838.51+
chromosomeIII2716931271785527174204524.91-
chromosomeIII3335655333647133359894292.67+
chromosomeIV9731049738479733494227.46+
chromosomeI6276129627706162765544179.99+
chromosomeII1654383165536616548484172.7-
chromosomeII7755180775602177555903996.58-
chromosomeIII3516937351760035172113708.38+
chromosomeIII6670542667146066711313693.9-
chromosomeII4408724440965644090513589.21-
Download the Full Peak List


Visualization

Manual





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