DNA Damage Atlas


GSM851661-DMC1_Hop2-KO




Basic Information

Manual

Sample ID:   

SRR391617 , SRR391618 , SRR391619


Source Project ID:   

GSE34592

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

9R female x 13R male F1


Genotype:   

Hop2-/-


Layout:   

PAIRED


Instrument model:   

Illumina Genome Analyzer II


Technique:   

ChIP-seq (anti-DMC1)


Others:   

control: GSM851664-IgG_control_rep1


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr614058915814059377514059155411.2694-
chr185678058556784916567842496.18407-
chr71401765111401809801401785705.7927+
chr118961003889613956896118605.2358-
chr194202076042024831420236295.17522-
chr64934205649346383493447945.16472+
chr95066360150668095506654044.9728+
chr111134033321134074291134056394.70517+
chr104190232941907317419055854.61711-
chr31076136071076186141076168114.54848+
Download the Full Peak List



Motif Analysis

Manual





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