DNA Damage Atlas


SRX10826026-HEK293T_50X_rep2




Basic Information

Manual

Sample ID:   

SRR14477835


Source Project ID:   

PRJNA728500

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

diluted in 50-fold


Layout:   

PAIRED


Instrument model:   

Illumina NovaSeq 6000


Technique:   

Ucaps-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM844387078582941.223-
chrM129131370113580857.129-
chrM138381605815507843.371-
chrM626766026571782.108-
chrM123391263112611767.729-
chrM37540143896419.359-
chr6742297877423093174230915115.762-
rDNA28145287502840870.855+
chr1568132376681326436813239848.1103+
rDNA23273237462356747.65+
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrM8443870785821031.46-
chrM129281370113580865.189-
chrM626966026571803.061-
chrM151851602815507717.303-
chrM314839873896609.534-
chr6742297877423093174230915111.977-
rDNA28153287502840880.8047+
rDNA23380237462356766.6655+
rDNA31761324873182852.5657+
chr1568132376681326436813239845.126+
Download the Full Merged Peak List



Motif Analysis

Manual





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