DNA Damage Atlas


SRX14113749-HeLa-S3_cells_XR_CPD_UV_1h




Basic Information

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Sample ID:   

SRR17957010


Source Project ID:   

PRJNA804872

Cell Type:   

HeLa-S3


Organism:   

Homo sapiens


Treatment:   

UVC


Treatment Time:   

10s


Treatment Dose:   

2J/m2


Harvested Time:   

repair time: 1h


Layout:   

SINGLE


Instrument model:   

Illumina NovaSeq 6000


Technique:   

XR-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr91342583271342590641342588453.91483/
chr7_gl000195_random7372875005745663.71609/
chr55538735545585541463.43612/
chr116180941861810487618097043.37375/
chr203019821830199048301984153.33897/
chr112914062829142474291418773.33158/
chr13241991632421120324203673.31078/
chr31896536701896565901896543363.2113/
chr31771609321771618931771613133.19984/
chr116672411666724915667243783.18343/
Download the Full Peak List



Motif Analysis

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