DNA Damage Atlas


SRX1865246-ChIP-preB-RPA-LIG4-53BP1-cycling-AsiSI




Basic Information

Manual

Sample ID:   

SRR3703223


Source Project ID:   

PRJNA326246

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Genotype:   

LIG4-/- 53BP1-/-


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

ChIP-seq (anti-RPA)


Others:   

control: SRX1867561-ChIP-preB-input


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr6124662921124662924/192/
chr9104126642104126645/192/
chr1133131826133131829/167/
chr11101784686101784689/154/
chr1131827650131827653/154/
chr3146812666146812669/154/
chr38790686187906864/154/
chr63835341438353417/154/
chr86484954964849552/154/
chr87028347570283478/154/
Download the Full Peak List




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