DNA Damage Atlas

SRX1865406-BLESS-preB-LIG4-G1-AsiSI-ENDseq-vs-BLESS

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR3703355, SRR3703257


Source Project ID:   

PRJNA326246

Cell Type:   

pre-B cell


Organism:   

Mus musculus


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

BLESS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.003968


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr131252031112520314/354625/
chr159939343499393437/279860/
chr86098284760982850/213982/
chr3145989049145989052/204382/
chr23223600532236008/199295/
chr3116808386116808389/194501/
chr2118746703118746706/165643/
chr195352894153528944/165199/
chr137327200373272006/137884/
chr2156144262156144265/125068/
Download the Full Peak List


Visualization

Manual





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