DNA Damage Atlas


SRX1867520-END-seq-preB-WT-cycling-AsiSI




Basic Information

Manual

Sample ID:   

SRR3705491


Source Project ID:   

PRJNA326246

Cell Type:   

Pre-B cell


Organism:   

Mus musculus


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Targeted break:   

AsiSI


Spike-in Intensity:   

no spike in


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.018858



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1143739618143739621/753487/
chr195352894153528944/727642/
chr12111039091111039094/719142/
chr9121477512121477515/703852/
chr159939343499393437/648641/
chr57329285273292855/606040/
chr4139192791139192794/572382/
chr155088950250889505/526780/
chr2156144262156144265/484087/
chr1125435718125435721/467178/
Download the Full Peak List




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