DNA Damage Atlas

SRX1867560-BLESS-preB-input

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR3705577


Source Project ID:   

PRJNA326246

Cell Type:   

pre-B cell


Organism:   

Mus musculus


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

BLESS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.019231


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr52549917825499181/10661.5/
chr63835341438353417/3046.13/
chr131252031112520314/1523.06/
chr137570811275708115/1523.06/
chr159939343499393437/1523.06/
chr186764176067641763/1523.06/
chr195352894153528944/1523.06/
chr195736170657361709/1523.06/
chr2157079218157079221/1523.06/
chr2157135297157135300/1523.06/
Download the Full Peak List


Visualization

Manual





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