DNA Damage Atlas

SRX231340-BLESS_HeLa_cells_data_samples_C1_and_C2

Basic Information Genome Browser Telomere Analysis Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR695321


Source Project ID:   

SRP018506

Cell Type:   

HeLa


Organism:   

Homo sapiens


Layout:   

SINGLE


Instrument model:   

Illumina Genome Analyzer II


Technique:   

BLESS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0


Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr2245022247450224504502244967.3015-
chrUn_gl00021611572054059.6814-
chrUn_gl00021618753189551895357.9726-
chr1878016111780163347801631256.8894-
chr711177898911177919311177899238.2695+
chr582811943828121548281194536.9999+
chr2137693525376937253769372534.1555-
chr217765011117765031117765011134.1555+
chr316849833716849853716849853734.1555-
chr411976205411976225411976205434.1555+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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