DNA Damage Atlas

SRX231376-Untreated_BLESS_barcoded_samples

Basic Information Genome Browser Telomere Analysis Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR695362


Source Project ID:   

SRP018506

Organism:   

Homo sapiens


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

BLESS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.145669


Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr7927885189278882692788718376.691-
chr14601893156018951560189515261.615-
chr2134973916134974225134974025257.677+
chr3721427847214298472142784255.928+
chr15845718328457214284572031245.838-
chr1151201061151201340151201261244.615-
chr7831259388312613883125938238.866+
chr7156834045156834245156834045204.743+
chr18725625937256296472562791202.351-
chr9360390173603929936039217193.61-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab