DNA Damage Atlas

SRX231413-BLESS_HeLa_cells_data_samples_A3_and_A4

Basic Information Genome Browser Telomere Analysis Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR695426


Source Project ID:   

SRP018506

Cell Type:   

HeLa


Organism:   

Homo sapiens


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

BLESS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 60.56522


Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr10129697471129697747129697671268.093-
chr12132998535132998735132998735154.871-
chr11753439527534420975344149127.218-
chr17200907232009092320090723120.455+
chr11131057166131057396131057196112.225+
chr2183854362183854562183854562111.851-
chr8344376133443781334437811111.851-
chrX550495825504978255049582111.851+
chr14994620879946236499462164105.608+
chr2473989874739926847399187104.104-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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