DNA Damage Atlas

SRX2547905-Modified-BLISS_for_DNA_accessibility_in_mouse_tissue_section

Basic Information Genome Browser Telomere Analysis Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR5241049


Source Project ID:   

SRP099132

Cell Type:   

Liver


Organism:   

Mus musculus


Strain:   

C57BL/6


Layout:   

SINGLE


Instrument model:   

illumina NextSeq 500


Technique:   

BLISS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.20979


Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr14159827081598293615982722895.859+
chrUn_GL456396118021221211960565.707+
chr12970610059706193297061787414.823-
chrUn_GL45638998611095110678306.949-
chrX143482775143483249143483104294.165-
chr2225871472259067022590071291.901+
chr2678697436786995767869944212.98-
chr6988980498906309890044153.275-
chr5101618101101618582101618375118.621+
chr5600425806004321560042942110.588+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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