DNA Damage Atlas


SRX6479626-HeLa_RPB1-K1268R_7J_12h_A304-405A_1




Basic Information

Manual

Sample ID:   

SRR9722133


Source Project ID:   

PRJNA548234

Cell Type:   

HeLa


Organism:   

Homo sapiens


Treatment:   

UVC


Treatment Time:   

12hrs


Treatment Dose:   

7J/m2


Genotype:   

RPB1-K1268R


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

TCR-seq (anti-RPB1-phospho-Ser2-CTD, clone 3E10)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
rDNA12478139871350024.6642/
rDNA75818003779118.1941/
rDNA69567403716217.1765/
chr128902400289094592890823216.988/
chr1620101722017726201150516.5036/
rDNA62866745652715.8769/
rDNA43187664215.7915/
chr1913259668132674621326399915.3776/
chr220645852206536892064846715.2102/
chr2242902696429093634290700114.6784/
Download the Full Peak List



Motif Analysis

Manual





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