DNA Damage Atlas


SRX6479635-HeLa_CSB_7J_6h_3E8_1




Basic Information

Manual

Sample ID:   

SRR9722124


Source Project ID:   

PRJNA548234

Cell Type:   

HeLa


Organism:   

Homo sapiens


Treatment:   

UVC


Treatment Time:   

6hrs


Treatment Dose:   

7J/m2


Genotype:   

ΔCSB


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

TCR-seq (anti-RPB1-phospho-Ser2-CTD, clone 3E10)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1249522495495270694952504626.1827/
chr1949374942493803104937577724.0536/
chr725163335251650842516480023.1392/
chr7_gl000195_random13787613874513849922.3352/
chr674227510742325287423062121.9732/
chrM0417322420.5179/
chr1774727035747347147473332919.3423/
chr221142067821142909321142215719.0246/
chr1716283916162855331628446918.9839/
chr974760994747675037476476718.3779/
Download the Full Peak List



Motif Analysis

Manual





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