DNA Damage Atlas


SRX6479661-HeLa_CSB_7J_5m_3E10_1




Basic Information

Manual

Sample ID:   

SRR9722098


Source Project ID:   

PRJNA548234

Cell Type:   

HeLa


Organism:   

Homo sapiens


Treatment:   

UVC


Treatment Time:   

5mins


Treatment Dose:   

7J/m2


Genotype:   

ΔCSB


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

TCR-seq (anti-RPB1-phospho-Ser5-CTD, clone 3E8)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX15374993415375658115375417928.4847/
chr1050227895029171502737227.4706/
chr1249666545496717884966859526.5956/
chr1249517796495222184952096525.834/
chr514566601459307145810825.6033/
chr1249522502495255374952452225.582/
chr1939684593973160397145724.2287/
chr1739844961398541483984863623.5463/
chr220646533206537392064941422.2956/
chr613313553913314479613314119622.1923/
Download the Full Peak List



Motif Analysis

Manual





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