DNA Damage Atlas


SRX6479683-HeLa_CSA_7J_5m_3E10_1




Basic Information

Manual

Sample ID:   

SRR9722076


Source Project ID:   

PRJNA548234

Cell Type:   

HeLa


Organism:   

Homo sapiens


Treatment:   

UVC


Treatment Time:   

5mins


Treatment Dose:   

7J/m2


Genotype:   

ΔCSA


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

TCR-seq (anti-RPB1-phospho-Ser2-CTD, clone 3E10)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr514566501459061145743929.6554/
chr1939683513973167397146626.825/
chr1249666581496722644966856925.1625/
chr1249517554495222234952080024.2895/
chr1762222313622315646222641722.9784/
chr1773769029737761667377229221.4991/
chr1249522499495255524952413520.7874/
chr223257802723258318123257886520.4728/
chr642857383428597294285830020.3249/
chr613226586313227267913226890519.9633/
Download the Full Peak List



Motif Analysis

Manual





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