DNA Damage Atlas


SRX6479699-HeLa_RPB1-K1268R_7J_5m_3E10_1




Basic Information

Manual

Sample ID:   

SRR9722060


Source Project ID:   

PRJNA548234

Cell Type:   

HeLa


Organism:   

Homo sapiens


Treatment:   

UVC


Treatment Time:   

5mins


Treatment Dose:   

7J/m2


Genotype:   

RPB1-K1268R


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

TCR-seq (anti-RPB1-phospho-Ser2-CTD, clone 3E10)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1249666474496717774966848129.4241/
chr1249517584495222764952080223.3809/
chr1939686183973218397153322.0752/
chr1762222229622312626222637921.3267/
chr627832627278358682783482820.148/
chr1773769023737762857377268818.7973/
chr317058021117058845617058326318.6325/
chr220645878206551262064940218.4975/
chr613226620913227302213226895217.8892/
chr867829444678379696783303717.8697/
Download the Full Peak List



Motif Analysis

Manual





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