DNA Damage Atlas


SRX7294478-U2OS_mainMIDAS_aph0_4




Basic Information

Manual

Sample ID:   

SRR10615349


Source Project ID:   

PRJNA588267

Cell Type:   

U2OS


Organism:   

Homo sapiens


Treatment:   

Aphidicolin


Treatment Dose:   

0.4uM


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 4000


Technique:   

MiDAS


Others:   

MIDAS main protocol


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM016399819978.4234/
chr462287000625071996239709910.9576/
chr211624640011629199911626919910.0352/
chr105744780057659799575537999.9833/
chr92899600029271999291339999.77524/
chr81377618001379297991378457999.24804/
chr108380880084103999839563998.96547/
chr92830900028348599283287998.14383/
rDNA2840028599284998.11284/
chr46251000062805599626577997.87193/
Download the Full Peak List



Motif Analysis

Manual





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