DNA Damage Atlas

SRX8461067-INDUCE-seq_HEK293T_untreated

Basic Information Genome Browser Telomere Analysis Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR11914560


Source Project ID:   

PRJNA636949

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

NT


Technique:   

INDUCE-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.142857


Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM34066168229.638-
chr19_gl000208_random513105143.6125+
chr1388558789885590348855901536.8837-
chr164763064647633286476326834.2292-
chr214531095614531122814531102733.2224+
chr1596866252968665329686625232.2732+
chr120914647220914675420914647232.0443+
chr156953814569541025695402031.3768-
chr1310028085010028114410028105030.7364-
chr1949946788499470874994680430.2224+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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