DNA Damage Atlas

SRX8461111-INDUCE-seq_DivA_uninduced_r1

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR11914516


Source Project ID:   

PRJNA636949

Cell Type:   

DiVA


Organism:   

Homo sapiens


Treatment:   

NT


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

INDUCE-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.659948


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr18945859889458601/385.685/
chr203736027037360273/385.685/
chr223886410338864106/385.685/
chr3178866539178866542/385.685/
chr63732181337321816/385.685/
chr79215773492157737/385.685/
chr92921280129212804/385.685/
chr1110036701110036704/192.843/
chr11120196324120196327/192.843/
chr118537565685375659/192.843/
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr18945859889458601/439.113/
chr178025084280250845/280.727/
chr2208030729208030732/182.832/
Download the Full Merged Peak List


Visualization

Manual





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