DNA Damage Atlas

SRX8461115-INDUCE-seq_DivA_uninduced_r2

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR11914512


Source Project ID:   

PRJNA636949

Cell Type:   

DiVA


Organism:   

Homo sapiens


Treatment:   

NT


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

INDUCE-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.647412


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr18945859889458601/587.606/
chr111109211110924/146.901/
chr1228328082228328085/146.901/
chr1231004235231004238/146.901/
chr172094630220946305/146.901/
chr1753902225390225/146.901/
chr175718429857184301/146.901/
chr178025084280250845/146.901/
chr1875667147566717/146.901/
chr194190374441903747/146.901/
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr18945859889458601/439.113/
chr178025084280250845/280.727/
chr2208030729208030732/182.832/
Download the Full Merged Peak List


Visualization

Manual





Copyright © 2023 All Rights Reserved by Wu lab