DNA Damage Atlas

SRX8461116-INDUCE-seq_DivA_uninduced_r3

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR11914511


Source Project ID:   

PRJNA636949

Cell Type:   

DiVA


Organism:   

Homo sapiens


Treatment:   

NT


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

INDUCE-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.679563


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr178025084280250845/391.582/
chr18945859889458601/391.582/
chr12130091882130091885/195.791/
chr122209399022093993/195.791/
chr145495582754955830/195.791/
chr172924903929249042/195.791/
chr181932080619320809/195.791/
chr193001948930019492/195.791/
chr212237044722370450/195.791/
chr2208030729208030732/195.791/
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr18945859889458601/439.113/
chr178025084280250845/280.727/
chr2208030729208030732/182.832/
Download the Full Merged Peak List


Visualization

Manual





Copyright © 2023 All Rights Reserved by Wu lab