DNA Damage Atlas



Basic Information

Dataset ID:

  GSE158570


PMID:

  33662762


Technique Type:

  HydEn-seq


Publication:

  Tracking Escherichia coli DNA polymerase V to the entire genome during the SOS response


First Author:

  Mahmood Faraz


Last Author:

  Anders R Clausen


Year:

  2021


Journal:

  DNA repair


Access Link:   

Samples ( 51 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM4803071-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pGB2-replicate1/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803072-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pRW134-replicate1/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803073-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782__kan_with_pJM963-replicate3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803074-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM963-replicate1/Escherichia coliNT////HydEn-seq
GSM4803075-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM963-replicate2/Escherichia coliNT////HydEn-seq
GSM4803076-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM963-replicate3/Escherichia coliNT////HydEn-seq
GSM4803077-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pGB2-replicate1/Escherichia coliNT////HydEn-seq
GSM4803078-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pGB2-replicate2/Escherichia coliNT////HydEn-seq
GSM4803079-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pGB2-replicate3/Escherichia coliNT////HydEn-seq
GSM4803080-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM1282-replicate1/Escherichia coliNT////HydEn-seq
GSM4803081-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM1282-replicate2/Escherichia coliNT////HydEn-seq
GSM4803082-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM1282-replicate3/Escherichia coliNT////HydEn-seq
GSM4803083-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM964-replicate1/Escherichia coliNT////HydEn-seq
GSM4803084-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM964-replicate2/Escherichia coliNT////HydEn-seq
GSM4803085-lexA51_Def_recA730_Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pJM964-replicate3/Escherichia coliNT////HydEn-seq
GSM4803086-lexA51_Def_recA730Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pRW134-replicate1/Escherichia coliNT////HydEn-seq
GSM4803087-lexA51_Def_recA730Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pRW134-replicate2/Escherichia coliNT////HydEn-seq
GSM4803088-lexA51_Def_recA730Δ_umuDC_596_ermGT_ΔdinB61_bleΔrnhB782_kan_with_pRW134-replicate3/Escherichia coliNT////HydEn-seq
GSM4803089-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pGB2-replicate2/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803090-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pGB2-replicate3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803091-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pRW134-replicate2/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803092-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pRW134-replicate3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803093-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782__kan_with_pJM963-replica2/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803094-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782__kan_with_pJM963-replica3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803095-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pGB2-replicate1/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803096-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pGB2-replicate2/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803097-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pGB2-replicate3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803098-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pRW134-replicate1/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803099-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pRW134-replicate2/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803100-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pRW134-replicate3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803101-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pJM963-replicate1/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803102-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pJM963-replicate2/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803103-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pJM963-replicate3/Escherichia coliCiprofloxacin////HydEn-seq
GSM4803104-DH5alpha-replicate1/Escherichia coliNT////HydEn-seq
GSM4803105-DH5alpha-replicate2/Escherichia coliNT////HydEn-seq
GSM4803106-DH5alpha-replicate3/Escherichia coliNT////HydEn-seq
GSM4803107-ΔrnhB782_kan-replicate1/Escherichia coliNT////HydEn-seq
GSM4803108-ΔrnhB782_kan-replicate2/Escherichia coliNT////HydEn-seq
GSM4803109-ΔrnhB782_kan-replicate3/Escherichia coliNT////HydEn-seq
GSM5200886-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pRW134_-_replicate_2/Escherichia coliNT////HydEn-seq
GSM5200888-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pRW134_-_replicate_3/Escherichia coliNT////HydEn-seq
GSM5200889-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782_kan_with_pRW134_-_replicate_4/Escherichia coliNT////HydEn-seq
GSM5200890-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782__kan_with_pJM963_replicate_2/Escherichia coliNT////HydEn-seq
GSM5200891-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782__kan_with_pJM963_replicate_3/Escherichia coliNT////HydEn-seq
GSM5200892-lexA51_Def__ΔumuDC596_ermGT_ΔdinB61_ble_ΔrnhB782__kan_with_pJM963_replicate_4/Escherichia coliNT////HydEn-seq
GSM5200893-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pRW134_replicate_2/Escherichia coliNT////HydEn-seq
GSM5200894-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pRW134_replicate_3/Escherichia coliNT////HydEn-seq
GSM5200895-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pRW134_replicate_4/Escherichia coliNT////HydEn-seq
GSM5200896-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pJM963_replicate_2/Escherichia coliNT////HydEn-seq
GSM5200898-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pJM963_replicate_3/Escherichia coliNT////HydEn-seq
GSM5200899-Δ__umuDC_596_ermGT_ΔdinB61_ble_ΔpolB_ΩSpc_ΔrnhB782_kan_with_pJM963_replicate_4/Escherichia coliNT////HydEn-seq


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