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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE76391
PMID:
27036006
Technique Type:
XR-seq
Publication:
Genome-wide kinetics of DNA excision repair in relation to chromatin state and mutagenesis
First Author:
Sheera Adar
Last Author:
Aziz Sancar
Year:
2016
Journal:
PANS
Access Link:
Samples ( 30 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM1985845-NHF1_CPD_1h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985846-NHF1_CPD_1h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985847-NHF1_CPD_4h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985848-NHF1_CPD_4h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985849-NHF1_CPD_8h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985850-NHF1_CPD_8h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985851-NHF1_CPD_16h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985852-NHF1_CPD_16h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985853-NHF1_CPD_24h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985854-NHF1_CPD_24h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985855-NHF1_CPD_48h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985856-NHF1_CPD_48h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985857-NHF1_6-4-PP_5min_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985858-NHF1_6-4-PP_5min_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985859-NHF1_6-4-PP_20min_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985860-NHF1_6-4-PP_20min_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985861-NHF1_6-4-PP_1h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985862-NHF1_6-4-PP_1h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985863-NHF1_6-4-PP_2h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985864-NHF1_6-4-PP_2h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985865-NHF1_6-4-PP_4h_XR-seq_Rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985866-NHF1_6-4-PP_4h_XR-seq_Rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985867-CS-B_6-4-PP_5min_XR-seq_Rep1 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985868-CS-B_6-4-PP_5min_XR-seq_Rep2 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985869-CS-B_6-4-PP_1h_XR-seq_Rep1 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985870-CS-B_6-4-PP_1h_XR-seq_Rep2 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985871-CS-B_6-4-PP_2h_XR-seq_Rep1 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985872-CS-B_6-4-PP_2h_XR-seq_Rep2 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985873-CS-B_6-4-PP_4h_XR-seq_Rep1 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1985874-CS-B_6-4-PP_4h_XR-seq_Rep2 | GM16095 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq |
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