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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE108932
PMID:
29666379
Technique Type:
XR-seq
Publication:
Genome-wide excision repair in Arabidopsis is coupled to transcription and reflects circadian gene expression patterns
First Author:
Onur Oztas
Last Author:
Ogun Adebali
Year:
2018
Journal:
Nature Communications
Access Link:
Samples ( 16 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM2916153-LD_ZT17_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916154-LD_ZT20_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916155-LD_ZT23_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916156-LD_ZT2_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916157-LD_ZT5_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916158-LD_ZT8_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916159-LD_ZT11_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916160-LD_ZT14_A_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916161-LD_ZT17_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916162-LD_ZT20_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916163-LD_ZT23_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916164-LD_ZT2_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916165-LD_ZT5_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916166-LD_ZT8_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916167-LD_ZT11_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq | |
| GSM2916168-LD_ZT14_B_XR-seq | seedlings | Arabidopsis thaliana | UVC (254 nm) | ecotype: Col-0 | / | / | / | XR-seq |
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