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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE121042
PMID:
30413533
Technique Type:
XR-seq
Publication:
Single-nucleotide resolution analysis of nucleotide excision repair of ribosomal DNA in humans and mice
First Author:
Yanyan Yang
Last Author:
Aziz Sancar
Year:
2019
Journal:
Journal of Biological Chemistry
Access Link:
Samples ( 10 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM3424992-mouseskinCPDcon1 | skin fibroblasts | Mus musculus | UV | WT | / | / | / | XR-seq | |
| GSM3424993-mouseskinCPDcon2 | skin fibroblasts | Mus musculus | UV | WT | / | / | / | XR-seq | |
| GSM3424994-NHF1CPDrep21 | NHF1 | Homo sapiens | UV | WT | / | / | / | XR-seq | |
| GSM3424995-NHF1CPDrep22 | NHF1 | Homo sapiens | UV | WT | / | / | / | XR-seq | |
| GSM3424996-CSBCPDrep1 | GM16095 | Homo sapiens | UV | CS-B mutant | / | / | / | XR-seq | |
| GSM3424997-CSBCPDrep2 | GM16095 | Homo sapiens | UV | CS-B mutant | / | / | / | XR-seq | |
| GSM3424998-XPCCPDrep1 | GM15983 | Homo sapiens | UV | XP-C mutant | / | / | / | XR-seq | |
| GSM3424999-XPCCPDrep2 | GM15983 | Homo sapiens | UV | XP-C mutant | / | / | / | XR-seq | |
| GSM3425000-GM12878cisRep1 | GM12878 | Homo sapiens | Cisplatin | WT | / | / | / | XR-seq | |
| GSM3425001-GM12878cisRep2 | GM12878 | Homo sapiens | Cisplatin | WT | / | / | / | XR-seq |
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