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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE181668
PMID:
34503990
Technique Type:
ChIP-seq
Publication:
Role of 53BP1 in end protection and DNA synthesis at DNA breaks
First Author:
Jacob Paiano
Last Author:
André Nussenzweig
Year:
2021
Journal:
Genes & Development
Access Link:
Samples ( 16 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM5508977-PreB-Lig4-18hrs-AsiSI-RPA-SSDS-control | Abel pre-B cell | Mus musculus | NT | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508978-PreB-Lig4-18hrs-AsiSI-RPA-SSDS-APH | Abel pre-B cell | Mus musculus | Aphidicolin | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508979-PreB-Lig4-18hrs-AsiSI-RPA-SSDS-POLAi | Abel pre-B cell | Mus musculus | POLA inhibitor | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508980-PreB-Lig4-18hrs-AsiSI-RPA-SSDS-control-rep2 | Abel pre-B cell | Mus musculus | NT | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508981-PreB-Lig4-18hrs-AsiSI-RPA-SSDS-APH-rep2 | Abel pre-B cell | Mus musculus | Aphidicolin | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508982-PreB-Lig4-18hrs-AsiSI-RPA-SSDS-POLAi-rep2 | Abel pre-B cell | Mus musculus | POLA inhibitor | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508983-PreB-Lig4-18hrs-AsisI-RPA-SSDS-HU | Abel pre-B cell | Mus musculus | Hydroxyurea | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508984-PreB-Lig4-18hrs-AsisI-RPA-SSDS-control-for-HU | Abel pre-B cell | Mus musculus | NT | Lig4-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508985-PreB-Lig4-53BP1-18hrs-AsisI-RPA-SSDS-clone1-APH | Abel pre-B cell | Mus musculus | Aphidicolin | Lig4-/- 53BP1-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508986-PreB-Lig4-53BP1-18hrs-AsisI-RPA-SSDS-clone1-contrl-for-APH-POLAi | Abel pre-B cell | Mus musculus | NT | Lig4-/- 53BP1-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508987-PreB-Lig4-53BP1-18hrs-AsisI-RPA-SSDS-clone1-POLAi | Abel pre-B cell | Mus musculus | POLA inhibitor | Lig4-/- 53BP1-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508988-PreB-Lig4-53BP1-18hrs-AsisI-RPA-SSDS-clone2-contrl-for-APH-POLAi | Abel pre-B cell | Mus musculus | NT | Lig4-/- 53BP1-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508989-PreB-Lig4-53BP1-18hrs-AsisI-RPA-SSDS-clone2-APH | Abel pre-B cell | Mus musculus | Aphidicolin | Lig4-/- 53BP1-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508990-PreB-Lig4-53BP1-18hrs-AsisI-RPA-SSDS-clone2-POLAi | Abel pre-B cell | Mus musculus | POLA inhibitor | Lig4-/- 53BP1-/- | / | G0/G1 | AsiSI | ChIP-seq (anti-RPA) | |
| GSM5508991-PreB-Lig4-53BP1-6hrs-AsiSI-MRE11-clone1 | Abel pre-B cell | Mus musculus | NT | Lig4-/-53BP1-/- | / | / | AsiSI | ChIP-seq (anti-MRE11) | |
| GSM5508992-PreB-Lig4-6hrs-AsiSI-MRE11 | Abel pre-B cell | Mus musculus | NT | Lig4-/- | / | / | AsiSI | ChIP-seq (anti-MRE11) |
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