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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE73007
PMID:
26593423
Technique Type:
HTGTS
Publication:
Chromosomal Loop Domains Direct the Recombination of Antigen Receptor Genes
First Author:
Jiazhi Hu
Last Author:
Frederick W Alt
Year:
2015
Journal:
Cell
Access Link:
Samples ( 40 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM1880614-IgH-AB-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, Eμ-Bcl-2 | / | / | IgH | HTGTS | |
| GSM1880615-IgH-AB-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, Eμ-Bcl-2 | / | / | IgH | HTGTS | |
| GSM1880616-IgH-AB-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, Eμ-Bcl-2 | / | / | IgH | HTGTS | |
| GSM1880617-IgH-AB-dIGCR1-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, delta-IGCR1, Eμ-Bcl-2 | / | / | IgH | HTGTS | |
| GSM1880618-IgH-AB-dIGCR1-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, delta-IGCR1, Eμ-Bcl-2 | / | / | IgH | HTGTS | |
| GSM1880619-IgH-AB-dIGCR1-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, delta-IGCR1, Eμ-Bcl-2 | / | / | IgH | HTGTS | |
| GSM1880620-DB-vAbl-Myc-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | c-Myc-DJb, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880621-DB-vAbl-Myc-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | c-Myc-DJb, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880622-DB-vAbl-Myc-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | c-Myc-DJb, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880623-DAB-vAbl-Myc-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880624-DAB-vAbl-Myc-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880625-DAB-vAbl-Myc-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880626-DB-BM-Myc-rep1 | BM pro B cell | Mus musculus | IL7 + SCF | c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880627-DB-BM-Myc-rep2 | BM pro B cell | Mus musculus | IL7 + SCF | c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880628-DB-BM-Myc-rep3 | BM pro B cell | Mus musculus | IL7 + SCF | c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880629-DAB-BM-Myc-rep1 | BM pro B cell | Mus musculus | IL7 + SCF | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880630-DAB-BM-Myc-rep2 | BM pro B cell | Mus musculus | IL7 + SCF | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880631-DAB-BM-Myc-rep3 | BM pro B cell | Mus musculus | IL7 + SCF | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | c-Myc-DJβ | HTGTS | |
| GSM1880632-DEL-SJ-12S-ATM | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880633-DEL-SJ-12S-WT | v-Abl pro-B cell | Mus musculus | STI-571 | DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880634-DEL-SJ-12S-ATMi | v-Abl pro-B cell | Mus musculus | STI-571 | DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880635-DEL-SJ-23S-ATM | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880636-DEL-SJ-23S-WT | v-Abl pro-B cell | Mus musculus | STI-571 | DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880637-DEL-SJ-23S-ATMi | v-Abl pro-B cell | Mus musculus | STI-571 | DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880638-SJ-chr1-GFP-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880639-SJ-chr1-GFP-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880640-SJ-chr1-GFP-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880641-SJ-chrX-GFP-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880642-SJ-chrX-GFP-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880643-SJ-chrX-GFP-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880644-RSSJ-chr1-12S-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880645-RSSJ-chr1-12S-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880646-RSSJ-chrX-12S-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880647-RSSJ-chrX-12S-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, DEL-SJ, Eμ-Bcl-2 | / | / | DEL-SJ | HTGTS | |
| GSM1880648-DAB-vAbl-Cas9-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | Cas9 site downsream of c-Myc | HTGTS | |
| GSM1880649-DAB-vAbl-Cas9-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | Cas9 site downsream of c-Myc | HTGTS | |
| GSM1880650-DAB-vAbl-Cas9-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, c-Myc-DJβ, Eμ-Bcl-2 | / | / | Cas9 site downsream of c-Myc | HTGTS | |
| GSM1880651-cRSS-chr1-rep1 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, Eμ-Bcl-2 | / | / | cryptic RSS site in Chromosome 1 | HTGTS | |
| GSM1880652-cRSS-chr1-rep2 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, Eμ-Bcl-2 | / | / | cryptic RSS site in Chromosome 1 | HTGTS | |
| GSM1880653-cRSS-chr1-rep3 | v-Abl pro-B cell | Mus musculus | STI-571 | ATM-/-, Eμ-Bcl-2 | / | / | cryptic RSS site in Chromosome 1 | HTGTS |
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