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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE98025
PMID:
28607063
Technique Type:
HS-Damage-seq
Publication:
Dynamic maps of UV damage formation and repair for the human genome
First Author:
Jinchuan Hu
Last Author:
Aziz Sancar
Year:
2017
Journal:
PANS
Access Link:
Samples ( 38 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM2585685-NHF1_CPD_Control_A | NFH1 | Homo sapiens | NA | / | / | / | / | HS-Damage-seq | |
| GSM2585686-NHF1_CPD_Control_B | NFH1 | Homo sapiens | NA | / | / | / | / | HS-Damage-seq | |
| GSM2585687-NHF1_CPD_10J_0h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585688-NHF1_CPD_10J_0h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585689-NHF1_CPD_10J_1h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585690-NHF1_CPD_10J_1h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585691-NHF1_CPD_10J_8h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585692-NHF1_CPD_10J_8h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585693-NHF1_CPD_10J_24h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585694-NHF1_CPD_10J_24h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585695-NHF1_CPD_10J_36h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585696-NHF1_CPD_10J_36h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585697-NHF1_CPD_10J_48h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585698-NHF1_CPD_10J_48h_B2 | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585699-NHF1_6-4_Control_A | NFH1 | Homo sapiens | NA | / | / | / | / | HS-Damage-seq | |
| GSM2585700-NHF1_6-4_Control_B | NFH1 | Homo sapiens | NA | / | / | / | / | HS-Damage-seq | |
| GSM2585701-NHF1_6-4_20J_0h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585702-NHF1_6-4_20J_0h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585703-NHF1_6-4_20J_20min_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585704-NHF1_6-4_20J_20min_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585705-NHF1_6-4_20J_1h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585706-NHF1_6-4_20J_1h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585707-NHF1_6-4_20J_2h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585708-NHF1_6-4_20J_2h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585709-NHF1_6-4_20J_4h_A | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585710-NHF1_6-4_20J_4h_B | NFH1 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585711-GM12878_6-4_20J_nakedDNA_A | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585712-GM12878_6-4_20J_nakedDNA_C | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585713-GM12878_6-4_20J_cell_A | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585714-GM12878_6-4_20J_cell_B | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585715-GM12878_CPD_20J_nakedDNA_A | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585716-GM12878_CPD_20J_nakedDNA_C | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585717-GM12878_CPD_20J_cell_A | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585718-GM12878_CPD_20J_cell_B | GM12878 | Homo sapiens | UV (254 nm) | / | / | / | / | HS-Damage-seq | |
| GSM2585719-NHF1_input_A | NFH1 | Homo sapiens | / | / | / | / | / | HS-Damage-seq | |
| GSM2585720-NHF1_input_B | NFH1 | Homo sapiens | / | / | / | / | / | HS-Damage-seq | |
| GSM2585721-GM12878_input_A | GM12878 | Homo sapiens | / | / | / | / | / | HS-Damage-seq | |
| GSM2585722-GM12878_input_B | GM12878 | Homo sapiens | / | / | / | / | / | HS-Damage-seq |
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