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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE113023
PMID:
29804837
Technique Type:
HTGTS
Publication:
CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning
First Author:
Suvi Jain
Last Author:
Frederick W Alt
Year:
2018
Journal:
Cell
Access Link:
Samples ( 43 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM3083436-pro-B_WT_rep1 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3083437-pro-B_WT_rep2 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3083438-pro-B_WT_rep3 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3083439-pro-B_VH81X-CBEscr-scr_rep1 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3083440-pro-B_VH81X-CBEscr-scr_rep2 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3083441-pro-B_VH81X-CBEscr-scr_rep3 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3083442-pro-B_VH81X-CBEscr-scr_rep4 | BM pro B cell | Mus musculus | / | / | / | / | / | HTGTS | |
| GSM3084364-DJ_WT_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | WT | / | / | / | HTGTS | |
| GSM3084365-DJ_WT_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | WT | / | / | / | HTGTS | |
| GSM3084366-DJ_WT_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | WT | / | / | / | HTGTS | |
| GSM3084367-DJ_VH81X-CBEdel_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084368-DJ_VH81X-CBEdel_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084369-DJ_VH81X-CBEdel_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084370-DJ_Intergenic-del_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel | / | / | / | HTGTS | |
| GSM3084371-DJ_Intergenic-del_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel | / | / | / | HTGTS | |
| GSM3084372-DJ_Intergenic-del_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel | / | / | / | HTGTS | |
| GSM3084373-DJ_Intergenic-del_VH81X-CBEdel_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084374-DJ_Intergenic-del_VH81X-CBEdel_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084375-DJ_Intergenic-del_VH81X-CBEdel_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084376-DJ_Intergenic-del_VH81X-CBEdel_rep4 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084377-DJ_Intergenic-del_VH81X-CBEdel_rep5 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | Intergenicdel VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084378-DJ_VH2-2-CBEscr_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH2-2-CBEscr | / | / | / | HTGTS | |
| GSM3084379-DJ_VH2-2-CBEscr_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH2-2-CBEscr | / | / | / | HTGTS | |
| GSM3084380-DJ_VH2-2-CBEscr_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH2-2-CBEscr | / | / | / | HTGTS | |
| GSM3084381-DJ_VH2-2-CBEscr_rep4 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH2-2-CBEscr | / | / | / | HTGTS | |
| GSM3084382-DJ_VH5-1-CBEins_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH5-1-CBEins | / | / | / | HTGTS | |
| GSM3084383-DJ_VH5-1-CBEins_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH5-1-CBEins | / | / | / | HTGTS | |
| GSM3084384-DJ_VH5-1-CBEins_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH5-1-CBEins | / | / | / | HTGTS | |
| GSM3084385-DJ_VH5-1-CBEins_rep4 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH5-1-CBEins | / | / | / | HTGTS | |
| GSM3084386-DJ_IGCR1del_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del | / | / | / | HTGTS | |
| GSM3084387-DJ_IGCR1del_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del | / | / | / | HTGTS | |
| GSM3084388-DJ_IGCR1del_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del | / | / | / | HTGTS | |
| GSM3084389-DJ_IGCR1del_VH81X-CBEdel_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084390-DJ_IGCR1del_VH81X-CBEdel_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084391-DJ_IGCR1del_VH81X-CBEdel_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3084392-DJ_IGCR1del_VH81X-CBEdel_rep4 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH81X-CBEdel | / | / | / | HTGTS | |
| GSM3150483-DJ_VH81X-CBEinv_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEinv | / | / | / | HTGTS | |
| GSM3150484-DJ_VH81X-CBEinv_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEinv | / | / | / | HTGTS | |
| GSM3150485-DJ_VH81X-CBEinv_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEinv | / | / | / | HTGTS | |
| GSM3150486-DJ_VH81X-CBEinv_rep4 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | VH81X-CBEinv | / | / | / | HTGTS | |
| GSM3150487-DJ_IGCR1del_VH5-1-CBEins_rep1 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH5-1-CBEins | / | / | / | HTGTS | |
| GSM3150488-DJ_IGCR1del_VH5-1-CBEins_rep2 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH5-1-CBEins | / | / | / | HTGTS | |
| GSM3150489-DJ_IGCR1del_VH5-1-CBEins_rep3 | v-Abl kinase transformed pro-B cell | Mus musculus | STI-571 | IGCR1del VH5-1-CBEins | / | / | / | HTGTS |
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