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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE51361
PMID:
25015380
Technique Type:
Excision-seq
Publication:
High resolution mapping of modified DNA nucleobases using excision repair enzymes
First Author:
D Suzi Bryan
Last Author:
Jay R Hesselberth
Year:
2014
Journal:
Genome Research
Access Link:
Samples ( 11 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM1243338-CPD_Beseq_replicate_1 | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243339-6-4pp_Beseq_replicate_1 | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243340-CPD_Beseq_replicate_2 | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243341-6-4pp_Beseq_replicate_2 | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243342-UDG_Predigestion_Beseq | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243343-UDG_Postdigestion_Beseq | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243344-ung1_UDG_Postdigestion_DNA_control | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243345-ung1_UDG_plus_5-FU_Postdigestion_Beseq | / | Saccharomyces cerevisiae | 5-fluorouracil | / | / | S | / | Excision-seq | |
| GSM1243346-Afu_UDG_Predigestion_Beseq_replicate_1_Y7092 | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243347-Afu_UDG_Predigestion_Beseq_replicate_2_BG234 | / | Saccharomyces cerevisiae | / | / | / | S | / | Excision-seq | |
| GSM1243348-E_coli_UDG_Predigestion_Beseq_normalized | / | Escherichia coli | / | / | / | S | / | Excision-seq |
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