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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE132840
PMID:
32355176
Technique Type:
XR-seq
Publication:
The cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase II
First Author:
Yana van der Weegen
Last Author:
Martijn S Luijsterburg
Year:
2020
Journal:
Nat Commun.
Access Link:
Samples ( 9 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM3893754-USOS-CPD-Xrseq_Rep1 | U2OS | Homo sapiens | UV (254 nm) | WT | / | / | / | XR-seq | |
| GSM3893755-USOS-CPD-Xrseq_Rep2 | U2OS | Homo sapiens | UV (254 nm) | WT | / | / | / | XR-seq | |
| GSM3893756-USOS-UVSSA-KO-CPD-Xrseq_Rep1 | U2OS | Homo sapiens | UV (254 nm) | UVSSA KO | / | / | / | XR-seq | |
| GSM3893757-USOS-UVSSA-KO-CPD-Xrseq_Rep2 | U2OS | Homo sapiens | UV (254 nm) | UVSSA KO | / | / | / | XR-seq | |
| GSM3893758-USOS-CSA-KO-CPD-Xrseq_Rep1 | U2OS | Homo sapiens | UV (254 nm) | CSA KO | / | / | / | XR-seq | |
| GSM4298926-GFP-UVSSA_WT_CPD-Xrseq_Rep1 | U2OS | Homo sapiens | UV (254 nm) | GFP-UVSSA | / | / | / | XR-seq | |
| GSM4298927-GFP-UVSSA_WT_CPD-Xrseq_Rep2 | U2OS | Homo sapiens | UV (254 nm) | GFP-UVSSA | / | / | / | XR-seq | |
| GSM4298928-GFP-UVSSA_CIR | U2OS | Homo sapiens | UV (254 nm) | GFP-UVSSA ΔCIR | / | / | / | XR-seq | |
| GSM4298929-GFP-UVSSA_TIR | U2OS | Homo sapiens | UV (254 nm) | GFP-UVSSA ΔTIR | / | / | / | XR-seq |
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