DNA Damage Atlas



Basic Information

Dataset ID:

  GSE136943


PMID:

  31649282


Technique Type:

  CC-seq


Publication:

  A nucleotide resolution map of Top2-linked DNA breaks in the yeast and human genome


First Author:

  William H Gittens


Last Author:

  Matthew J Neale


Year:

  2019


Journal:

  Nature Communications


Access Link:   

Samples ( 23 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM4062179-WT_Async_UT_Rep1RPE1Homo sapiensNTWT///CC-seq
GSM4062180-WT_Async_VP16_Rep1RPE1Homo sapiensVP16WT///CC-seq
GSM4062181-WT_G1_UT_Rep1RPE1Homo sapiensNTWT/G1/CC-seq
GSM4062182-WT_G1_VP16_Rep1RPE1Homo sapiensVP16WT/G1/CC-seq
GSM4062183-WT_Async_UT_Rep2RPE1Homo sapiensNTWT///CC-seq
GSM4062184-WT_Async_UT_Rep2_bRPE1Homo sapiensNTWT///CC-seq
GSM4062185-WT_Async_VP16_Rep2RPE1Homo sapiensVP16WT///CC-seq
GSM4062186-WT_Async_VP16_Rep2_bRPE1Homo sapiensVP16WT///CC-seq
GSM4062187-top2b-KO_G1_UT_Rep1RPE1Homo sapiensNTTOP2B-/-/G1/CC-seq
GSM4062188-top2b-KO_G1_VP16_Rep1RPE1Homo sapiensVP16TOP2B-/-/G1/CC-seq
GSM4062189-top2b-KO_Async_UT_Rep1RPE1Homo sapiensNTTOP2B-/-///CC-seq
GSM4062190-top2b-KO_Async_VP16_Rep1RPE1Homo sapiensVP16TOP2B-/-///CC-seq
GSM4062191-WT_G1_UT_Rep2RPE1Homo sapiensNTWT/G1/CC-seq
GSM4062192-WT_G1_VP16_Rep2RPE1Homo sapiensVP16WT/G1/CC-seq
GSM4062193-WT_Async_UT_Rep3RPE1Homo sapiensNTWT///CC-seq
GSM4062194-WT_Async_UT_Rep3_bRPE1Homo sapiensNTWT///CC-seq
GSM4062195-WT_Async_VP16_Rep3RPE1Homo sapiensVP16WT///CC-seq
GSM4062196-WT_Async_VP16_Rep3_bRPE1Homo sapiensVP16WT///CC-seq
GSM4062197-top2b-KO_G1_UT_Rep2RPE1Homo sapiensNTTOP2B-/-/G1/CC-seq
GSM4062198-top2b-KO_G1_VP16_Rep2RPE1Homo sapiensVP16TOP2B-/-/G1/CC-seq
GSM4062199-top2b-KO_Async_UT_Rep2RPE1Homo sapiensNTTOP2B-/-///CC-seq
GSM4062200-top2b-KO_Async_VP16_Rep2RPE1Homo sapiensVP16TOP2B-/-///CC-seq
GSM4062201-WT_Async_VP16_Rep4RPE1Homo sapiensVP16WT///CC-seq


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