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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE34592
PMID:
22367190
Technique Type:
ChIP-seq
Publication:
Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA
First Author:
Pavel P Khil
Last Author:
Galina V Petukhova
Year:
2012
Journal:
Genome Research
Access Link:
Samples ( 11 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM851661-DMC1_Hop2-KO | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-DMC1) | |
| GSM851662-RAD51_Hop2-KO_rep1 | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-RAD51) | |
| GSM851663-RAD51_Hop2-KO_rep2 | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-RAD51) | |
| GSM851664-IgG_control_rep1 | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-IgG) | |
| GSM851665-IgG_control_rep2 | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-IgG) | |
| GSM851666-DMC1_Hop2-KO_Klenow_exo- | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-DMC1) | |
| GSM851667-DMC1_Hop2-KO_Klenow_exo-_12C | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-DMC1) | |
| GSM851668-DMC1 | Testis | Mus musculus | / | / | / | / | / | ChIP-seq (anti-DMC1) | |
| GSM851669-DMC1_Hop2-KO_KE | Testis | Mus musculus | / | Hop2-/- | / | / | / | ChIP-seq (anti-DMC1) | |
| GSM851670-DMC1_KE | Testis | Mus musculus | / | / | / | / | / | ChIP-seq (anti-DMC1) | |
| GSM851671-IgG_control_KE | Testis | Mus musculus | / | / | / | / | / | ChIP-seq (anti-IgG) |
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