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DNA Damage Atlas |
Basic Information
Dataset ID:
 GSE100234
PMID:
 30462294
Technique Type:
  ChIP-seq + OxiDIP-Seq
Publication:
 Genome-wide mapping of 8-oxo-7,8-dihydro-2'-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of mammalian cells
First Author:
 Stefano Amente
Last Author:
 Barbara Majello
Year:
 2019
Journal:
 Nucleic Acids Research
Access Link:  
Samples ( 8 )
Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
GSM2675538-ChIP_gH2AX_exp1_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
GSM2675539-ChIP_gH2AX_exp2_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
GSM2675535-Input_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | ChIP-seq (Input) | |
GSM2675536-DIP_8oxodG_exp1_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | OxiDIP-Seq | |
GSM2675537-DIP_8oxodG_exp2_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | OxiDIP-Seq | |
GSM2675540-Input_MEF | MEF | Mus musculus | / | / | / | / | / | OxiDIP-Seq | |
GSM2675541-DIP_8oxodG_exp1_MEF | MEF | Mus musculus | / | / | / | / | / | OxiDIP-Seq | |
GSM2675542-DIP_8oxodG_exp2_MEF | MEF | Mus musculus | / | / | / | / | / | OxiDIP-Seq |
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