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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE100234
PMID:
30462294
Technique Type:
ChIP-seq + OxiDIP-Seq
Publication:
Genome-wide mapping of 8-oxo-7,8-dihydro-2'-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of mammalian cells
First Author:
Stefano Amente
Last Author:
Barbara Majello
Year:
2019
Journal:
Nucleic Acids Research
Access Link:
Samples ( 8 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM2675538-ChIP_gH2AX_exp1_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2675539-ChIP_gH2AX_exp2_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2675535-Input_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | ChIP-seq (Input) | |
| GSM2675536-DIP_8oxodG_exp1_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | OxiDIP-Seq | |
| GSM2675537-DIP_8oxodG_exp2_MCF10A | MCF-10A | Homo sapiens | / | / | / | / | / | OxiDIP-Seq | |
| GSM2675540-Input_MEF | MEF | Mus musculus | / | / | / | / | / | OxiDIP-Seq | |
| GSM2675541-DIP_8oxodG_exp1_MEF | MEF | Mus musculus | / | / | / | / | / | OxiDIP-Seq | |
| GSM2675542-DIP_8oxodG_exp2_MEF | MEF | Mus musculus | / | / | / | / | / | OxiDIP-Seq |
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