 |
DNA Damage Atlas |
|
|
DNA Damage Atlas |
Basic Information
Dataset ID:
GSE80682
PMID:
28199841
Technique Type:
ChIP-seq
Publication:
Lineage-Specific Genes Are Prominent DNA Damage Hotspots during Leukemic Transformation of B Cell Precursors
First Author:
Bryant Boulianne
Last Author:
Niklas Feldhahn
Year:
2017
Journal:
Cell Reports
Access Link:
Samples ( 12 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM2133282-BCR-ABL1_gH2AX_rep1_ChIPseq | Primary B cell precursors (BCR-ABL1 expressing) | Mus musculus | NT | 53BP1-/- | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133283-C-MYC_gH2AX_rep1_ChIPseq | Primary B cell precursors (C-MYC expressing) | Mus musculus | NT | 53BP1-/- | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133285-BCR-ABL1_-D50_gH2AX_ChIPseq | Primary B cell precursors (BCR-ABL1 expressing) | Mus musculus | Hydroxyurea | 53BP1-/- | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133287-BCR-ABL1_gH2AX_rep2_ChIPseq | Primary B cell precursors (BCR-ABL1 expressing) | Mus musculus | NT | 53BP1-/- | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133288-C-MYC_gH2AX_rep2_ChIPseq | Primary B cell precursors (C-MYC expressing) | Mus musculus | NT | 53BP1-/- | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133289-BCR-ABL1_input_ChIPseq | Primary B cell precursors (BCR-ABL1 expressing) | Mus musculus | NT | 53BP1-/- | / | / | / | ChIP-seq (Input) | |
| GSM2133290-C-MYC_input_ChIPseq | Primary B cell precursors (C-MYC expressing) | Mus musculus | NT | 53BP1-/- | / | / | / | ChIP-seq (Input) | |
| GSM2133293-CEBPAplusDOX_gH2AX_ChIPseq | Transformed B cell | Mus musculus | Doxycycline + Dox-inducible CEBPA vector | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133294-CEBPAminusDOX_gH2AX_ChIPseq | Transformed B cell | Mus musculus | NT + Dox-inducible CEBPA vector | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM2133295-CEBPAplusDOX_input_ChIPseq | Transformed B cell | Mus musculus | Doxycycline + Dox-inducible CEBPA vector | / | / | / | / | ChIP-seq (Input) | |
| GSM2133296-CEBPAminusDOX_input_ChIPseq | Transformed B cell | Mus musculus | NT + Dox-inducible CEBPA vector | / | / | / | / | ChIP-seq (Input) | |
| GSM2133297-EVplusDOX_gH2AX_ChIPseq | Transformed B cell | Mus musculus | Doxycycline + Empty vector | / | / | / | / | ChIP-seq (anti-γH2AX) |
Copyright © 2023 All Rights Reserved by Wu lab