By Dataset

DNA Damage Atlas

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Total Page: 14 Total entries: 263

Technique：

Dataset ID	Technique Type	Publication	Last Author	Year	Journal	Samples
GSE213884	END-seq	The nematode Oscheius tipulae as a genetic model for programmed DNA elimination	Jianbin Wang	2022	Current Biology	15
GSE26449	SPO11-oligo	A hierarchical combination of factors shapes the genome-wide topography of yeast meiotic recombination initiation	Scott Keeney	2011	Cell	4
GSE34592	ChIP-seq	Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA	Galina V Petukhova	2012	Genome Research	11
GSE48299	SPO11-oligo	Homologue engagement controls meiotic DNA break number and distribution	Scott Keeney	2014	Nature	4
GSE48493	ChIP-seq	Suppression of genetic recombination in the pseudoautosomal region and at subtelomeres in mice with a hypomorphic Spo11 allele	Galina V Petukhova	2013	BMC Genomics	6
GSE51361	Excision-seq	High resolution mapping of modified DNA nucleobases using excision repair enzymes	Jay R Hesselberth	2014	Genome Research	11
GSE53755	HTGTS	IgH class switching exploits a general property of two DNA breaks to be joined in cis over long chromosomal distances	Frederick W Alt	2014	PANS	13
GSE57283	LAM-HTGTS	Genome-wide detection of DNA double-stranded breaks induced by engineered nucleases	Frederick W Alt	2015	Nature Biotechnology	108
GSE58599	HTGTS	Developmental propagation of V(D)J recombination-associated DNA breaks and translocations in mature B cells via dicentric chromosomes	Frederick W Alt	2014	PANS	16
GSE58808	Break-seq	Break-seq reveals hydroxyurea-induced chromosome fragility as a result of unscheduled conflict between DNA replication and transcription	Wenyi Feng	2015	Genome Research	13
GSE59836	ChIP-seq	DNA recombination. Recombination initiation maps of individual human genomes	R Daniel Camerini-Otero	2014	Science	9
GSE60526	ChIP-seq	Identification of the elementary structural units of the DNA damage response	M Cristina Cardoso	2017	Nature Communications	6
GSE61464	Ribose-seq	Ribose-seq: global mapping of ribonucleotides embedded in genomic DNA	Francesca Storici	2015	Nature Methods	9
GSE62181	HydEn-seq	Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation	Thomas A Kunkel	2015	Nature Structural & Molecular Biolology	29
GSE62927	BLESS	Anthracyclines induce double-strand DNA breaks at active gene promoters	Steven Henikoff	2015	Mutation Research	11
GSE63202	ChIP-seq	Ligand-dependent enhancer activation regulated by topoisomerase-I activity	Michael G Rosenfeld	2015	Cell	2
GSE67910	SPO11-oligo	High-Resolution Global Analysis of the Influences of Bas1 and Ino4 Transcription Factors on Meiotic DNA Break Distributions in Saccharomyces cerevisiae	Scott Keeney	2015	Genetics	9
GSE67941	XR-seq	Genome-wide analysis of human global and transcription-coupled excision repair of UV damage at single-nucleotide resolution	Aziz Sancar	2015	Genes & Development	12
GSE69140	ChIP-seq	7SK-BAF axis controls pervasive transcription at enhancers	Howard Y Chang	2016	Nature Structural & Molecular Biolology	12
GSE71005	HTGTS	Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching	Frederick W Alt	2015	Nature	122

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