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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE67941
PMID:
25934506
Technique Type:
XR-seq
Publication:
Genome-wide analysis of human global and transcription-coupled excision repair of UV damage at single-nucleotide resolution
First Author:
Jinchuan Hu
Last Author:
Aziz Sancar
Year:
2015
Journal:
Genes & Development
Access Link:
Samples ( 12 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM1659156-NHF1_CPD_XR-seq_rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1659157-NHF1_CPD_XR-seq_rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1659158-NHF1_6-4PP_XR-seq_rep1 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1659159-NHF1_6-4PP_XR-seq_rep2 | NHF1 | Homo sapiens | UV (254 nm) | / | / | / | / | XR-seq | |
| GSM1659160-XP-C_CPD_XR-seq_rep1 | GM15983 | Homo sapiens | UV (254 nm) | XP-C mutant | / | / | / | XR-seq | |
| GSM1659161-XP-C_CPD_XR-seq_rep2 | GM15983 | Homo sapiens | UV (254 nm) | XP-C mutant | / | / | / | XR-seq | |
| GSM1659162-XP-C_6-4PP_XR-seq_rep1 | GM15983 | Homo sapiens | UV (254 nm) | XP-C mutant | / | / | / | XR-seq | |
| GSM1659163-XP-C_6-4PP_XR-seq_rep2 | GM15983 | Homo sapiens | UV (254 nm) | XP-C mutant | / | / | / | XR-seq | |
| GSM1659164-CS-B_CPD_XR-seq_rep1 | GM16095 | Homo sapiens | UV (254 nm) | CS-B mutant | / | / | / | XR-seq | |
| GSM1659165-CS-B_CPD_XR-seq_rep2 | GM16095 | Homo sapiens | UV (254 nm) | CS-B mutant | / | / | / | XR-seq | |
| GSM1659166-CS-B_6-4PP_XR-seq_rep1 | GM16095 | Homo sapiens | UV (254 nm) | CS-B mutant | / | / | / | XR-seq | |
| GSM1659167-CS-B_6-4PP_XR-seq_rep2 | GM16095 | Homo sapiens | UV (254 nm) | CS-B mutant | / | / | / | XR-seq |
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