DNA Damage Atlas

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 Total Page: 14 Total entries: 263



    

Dataset IDTechnique TypePublicationLast AuthorYearJournalSamples
GSE121042XR-seqSingle-nucleotide resolution analysis of nucleotide excision repair of ribosomal DNA in humans and miceAziz Sancar2019Journal of Biological Chemistry10
GSE121740sBLISSSpatial Chromosome Folding and Active Transcription Drive DNA Fragility and Formation of Oncogenic MLL TranslocationsVassilis Roukos2019Molecular Cell18
GSE122882SPO11-oligoPersistent DNA-break potential near telomeres increases initiation of meiotic recombination on short chromosomesAndreas Hochwagen2019Nature Communications4
GSE124132Break-seqYeast Sirtuin Family Members Maintain Transcription Homeostasis to Ensure Genome StabilityCraig L Peterson2019Cell Reports4
GSE124403Break-seqReplication Stress Induces Global Chromosome Breakage in the Fragile X GenomeWenyi Feng2020Cell Reports27
GSE124948ChIP-seqQuantitative sensing and signalling of single-stranded DNA during the DNA damage responseBoris Pfander2019Nature Communications12
GSE125379ChIP-seqRB1 Deletion in Retinoblastoma Protein Pathway-Disrupted Cells Results in DNA Damage and Cancer ProgressionFrederick A Dick2019Molecular and Cellular Biology9
GSE125855HydEn-seqoles for DNA polymerase δ in initiating and terminating leading strand DNA replicationThomas A Kunkel2019Nature Communications58
GSE126443ChIP-seqMouse ANKRD31 Regulates Spatiotemporal Patterning of Meiotic Recombination Initiation and Ensures Recombination between X and Y Sex ChromosomesAttila Toth2019Molecular Cell4
GSE126822U-DNA-seqGenome-wide alterations of uracil distribution patterns in human DNA upon chemotherapeutic treatmentsBeáta G Vértessy2020eLife32
GSE127966CPD-seqIntragenomic variability and extended sequence patterns in the mutational signature of ultraviolet lightErik Larsson2019PANS3
GSE129524END-seqTopoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional ActivityAndré Nussenzweig2019Molecular Cell48
GSE129528HTGTSTopoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional ActivityAndré Nussenzweig2019Molecular Cell10
GSE129895HTGTSPhosphorylation at S2053 in Murine (S2056 in Human) DNA-PKcs Is Dispensable for Lymphocyte Development and Class Switch RecombinationShan Zha2019Journal of Immunology3
GSE130216HTGTS V(D)J-seqThe fundamental role of chromatin loop extrusion in physiological V(D)J recombinationFrederick W Alt2019Nature76
GSE130265CSR-HTGTSFundamental roles of chromatin loop extrusion in antibody class switchingFrederick W Alt2019Nature21
GSE131101CPD-seqAsymmetric repair of UV damage in nucleosomes imposes a DNA strand polarity on somatic mutations in skin cancerJohn J Wyrick2020Genome Research5
GSE132002XR-seqLong-term, genome-wide kinetic analysis of the effect of the circadian clock and transcription on the repair of cisplatin-DNA adducts in the mouse liverAziz Sancar2019Journal of Biological Chemistry25
GSE132137DSB-seqChd1 protects genome integrity at promoters to sustain hypertranscription in embryonic stem cellsMiguel Ramalho-Santos2021Nature Communications4
GSE132840XR-seqThe cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase IIMartijn S Luijsterburg2020Nat Commun.9

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