DNA Damage Atlas

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 Total Page: 14 Total entries: 263



    

Dataset IDTechnique TypePublicationLast AuthorYearJournalSamples
GSE167257SAR-seqNeuronal enhancers are hotspots for DNA single-strand break repairAndré Nussenzweig2021Nature67
GSE168369CPD-seqDistinct roles for RSC and SWI/SNF chromatin remodelers in genomic excision repairJohn J Wyrick2021Genome Research3
GSE171042Protec-seqSpo11 generates gaps through concerted cuts at sites of topological stressFranz Klein2021Nature31
GSE171242GLOE-SeqCancer cells use self-inflicted DNA breaks to evade growth limits imposed by genotoxic stressClaus S Sørensen2022Science18
GSE171969CPD-seqPervasive Transcription-coupled DNA repair in E. coliEvgeny Nudler2022Nature Communications48
GSE173126CPD-seqRetinoblastoma protein regulates carcinogen susceptibility at heterochromatic cancer driver lociAshby J Morrison2022Life Science Alliance2
GSE173201XR-seqGenomic Characterization of Cisplatin Response Uncovers Priming of Cisplatin-Induced Genes in a Resistant Cell LineSheera Adar2021International Journal of Molecular Sciences2
GSE174296CSR-HTGTSSwitch Tandem Repeats Influence the Choice of the Alternative End-Joining Pathway in Immunoglobulin Class Switch RecombinationAhmed Amine Khamlichi2022Frontiers in Immunology26
GSE174496HTGTSDNA damage–induced phosphorylation of CtIP at a conserved ATM/ATR site T855 promotes lymphomagenesis in miceShan Zha2021PANS18
GSE178316ChIP-seqThe adeno-associated virus 2 genome and Rep 68/78 proteins interact with cellular sites of DNA damageKinjal Majumder2022Human Molecular Genetics24
GSE178585XR-seqCircadian clock, carcinogenesis, chronochemotherapy connectionsAziz Sancar2021Journal of Biological Chemistry36
GSE179794CPD-seqSet2 histone methyltransferase regulates transcription coupled-nucleotide excision repair in yeastJohn J Wyrick2022PLoS Genetics12
GSE179963ChIP-seqDistribution of Holliday junctions and repair forks during Escherichia coli DNA double-strand break repairDavid R F Leach2021PLoS Genetics2
GSE181312CLAPS-seqGenome-wide analysis of 8-oxo-7,8-dihydro-2'-deoxyguanosine at single-nucleotide resolution unveils reduced occurrence of oxidative damage at G-quadruplex sitesJinchuan Hu2021Nucleic Acids Research10
GSE181667SAR-seqRole of 53BP1 in end protection and DNA synthesis at DNA breaksAndré Nussenzweig2021Genes & Development42
GSE181668ChIP-seqRole of 53BP1 in end protection and DNA synthesis at DNA breaksAndré Nussenzweig2021Genes & Development16
GSE181669END-seqRole of 53BP1 in end protection and DNA synthesis at DNA breaksAndré Nussenzweig2021Genes & Development49
GSE183147sBLISSR-loop proximity proteomics identifies a role of DDX41 in transcription-associated genomic instabilityPetra Beli2021Nature Communications4
GSE183622NMP-seqHigh-resolution mapping demonstrates inhibition of DNA excision repair by transcription factorsPeng Mao2022eLife12
GSE184926XR-seqCSB-independent, XPC-dependent transcription-coupled repair in DrosophilaZhenxing Liu2022PANS73

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